| Train | Source | Destination | Days Run from Trivandrum Central |
| 16629 - Malabar Express | Trivandrum Central (TVC) | Mangalore Central (MAQ) | Mon Tue Wed Fri Sat Sun |
| # | Station | Arrival | Departure | Halt | Distance | Day |
| 1 | Trivandrum Central (TVC) | Source | 06:45 PM | 0 Mins | 0 KMs | 1 |
| 2 | Kazhakuttam (KZK) | 06:59 PM | 07:00 PM | 0 Mins | 13 KMs | 1 |
| 3 | Murukkampuzha (MQU) | 07:07 PM | 07:08 PM | 0 Mins | 21 KMs | 1 |
| 4 | Chirayinkil (CRY) | 07:14 PM | 07:15 PM | 0 Mins | 28 KMs | 1 |
| 5 | Kadakavur (KVU) | 07:19 PM | 07:20 PM | 0 Mins | 31 KMs | 1 |
| 6 | Varkala Shivagiri (VAK) | 07:30 PM | 07:31 PM | 0 Mins | 41 KMs | 1 |
| 7 | Paravur (PVU) | 07:41 PM | 07:42 PM | 0 Mins | 52 KMs | 1 |
| 8 | Quilon Jn.(kollam) (QLN) | 08:17 PM | 08:20 PM | 0 Mins | 64 KMs | 1 |
| 9 | Sasthankotta (STKT) | 08:35 PM | 08:36 PM | 0 Mins | 84 KMs | 1 |
| 10 | Karunagapalli (KPY) | 08:47 PM | 08:48 PM | 0 Mins | 91 KMs | 1 |
| 11 | Kayankulam (KYJ) | 09:05 PM | 09:07 PM | 0 Mins | 105 KMs | 1 |
| 12 | Mavelikara (MVLK) | 09:16 PM | 09:17 PM | 0 Mins | 113 KMs | 1 |
| 13 | Chengannur (CNGR) | 09:25 PM | 09:27 PM | 0 Mins | 125 KMs | 1 |
| 14 | Tiruvalla (TRVL) | 09:37 PM | 09:38 PM | 0 Mins | 134 KMs | 1 |
| 15 | Changanacheri (CGY) | 09:48 PM | 09:49 PM | 0 Mins | 142 KMs | 1 |
| 16 | Kottayam (KTYM) | 10:22 PM | 10:25 PM | 0 Mins | 160 KMs | 1 |
| 17 | Piravam Road (PVRD) | 10:54 PM | 10:55 PM | 0 Mins | 191 KMs | 1 |
| 18 | Tripunitura (TRTR) | 11:09 PM | 11:10 PM | 0 Mins | 210 KMs | 1 |
| 19 | Ernakulam Town (ERN) | 11:45 PM | 11:50 PM | 0 Mins | 223 KMs | 1 |
| 20 | Alwaye (AWY) | 12:18 AM | 12:20 AM | 0 Mins | 240 KMs | 1 |
| 21 | Angamali For Kaladi (AFK) | 12:29 AM | 12:30 AM | 0 Mins | 249 KMs | 1 |
| 22 | Chalakudi (CKI) | 12:46 AM | 12:47 AM | 0 Mins | 264 KMs | 1 |
| 23 | Irinjalakuda (IJK) | 12:55 AM | 12:56 AM | 0 Mins | 270 KMs | 1 |
| 24 | Trichur (TCR) | 01:27 AM | 01:30 AM | 0 Mins | 294 KMs | 1 |
| 25 | Shoranur Jn. (SRR) | 02:45 AM | 02:55 AM | 0 Mins | 327 KMs | 1 |
| 26 | Pattambi (PTB) | 03:08 AM | 03:10 AM | 0 Mins | 339 KMs | 1 |
| 27 | Kuttippuram (KTU) | 03:29 AM | 03:30 AM | 0 Mins | 357 KMs | 1 |
| 28 | Tirur (TIR) | 03:48 AM | 03:50 AM | 0 Mins | 372 KMs | 1 |
| 29 | Tanur (TA) | 03:59 AM | 04:00 AM | 0 Mins | 380 KMs | 1 |
| 30 | Parpanangadi (PGI) | 04:06 AM | 04:08 AM | 0 Mins | 388 KMs | 1 |
| 31 | Ferok (FK) | 04:24 AM | 04:25 AM | 0 Mins | 403 KMs | 1 |
| 32 | Calicut (CLT) | 04:45 AM | 04:50 AM | 0 Mins | 413 KMs | 1 |
| 33 | Quilandi (QLD) | 05:09 AM | 05:10 AM | 0 Mins | 438 KMs | 1 |
| 34 | Badagara (BDJ) | 05:28 AM | 05:30 AM | 0 Mins | 459 KMs | 1 |
| 35 | Mahe (MAHE) | 05:39 AM | 05:40 AM | 0 Mins | 472 KMs | 1 |
| 36 | Tellicherry (TLY) | 05:53 AM | 05:55 AM | 0 Mins | 481 KMs | 1 |
| 37 | Cannanore (CAN) | 06:50 AM | 06:55 AM | 0 Mins | 502 KMs | 1 |
| 38 | Valapattinam (VAPM) | 07:04 AM | 07:05 AM | 0 Mins | 509 KMs | 1 |
| 39 | Kannapuram (KPQ) | 07:14 AM | 07:15 AM | 0 Mins | 517 KMs | 1 |
| 40 | Payangadi (PAZ) | 07:22 AM | 07:23 AM | 0 Mins | 524 KMs | 1 |
| 41 | Elimala (ELM) | 07:29 AM | 07:30 AM | 0 Mins | 531 KMs | 1 |
| 42 | Payyanur (PAY) | 07:38 AM | 07:40 AM | 0 Mins | 536 KMs | 1 |
| 43 | Trikarpur (TKQ) | 07:44 AM | 07:45 AM | 0 Mins | 542 KMs | 1 |
| 44 | Charvattur (CHV) | 07:59 AM | 08:00 AM | 0 Mins | 550 KMs | 1 |
| 45 | Nileshwar (NLE) | 08:09 AM | 08:10 AM | 0 Mins | 556 KMs | 1 |
| 46 | Kanhangad (KZE) | 08:18 AM | 08:20 AM | 0 Mins | 565 KMs | 1 |
| 47 | Bekal Fort (BFR) | 08:27 AM | 08:28 AM | 0 Mins | 574 KMs | 1 |
| 48 | Kotikulam (KQK) | 08:34 AM | 08:35 AM | 0 Mins | 579 KMs | 1 |
| 49 | Kasaragod (KGQ) | 08:43 AM | 08:45 AM | 0 Mins | 588 KMs | 1 |
| 50 | Kumbla (KMQ) | 08:54 AM | 08:55 AM | 0 Mins | 600 KMs | 1 |
| 51 | Uppala (UAA) | 09:04 AM | 09:05 AM | 0 Mins | 610 KMs | 1 |
| 52 | Manjeshwar (MJS) | 09:13 AM | 09:15 AM | 0 Mins | 617 KMs | 1 |
| 53 | Ullal (ULL) | 09:24 AM | 09:25 AM | 0 Mins | 625 KMs | 1 |
| 54 | Mangalore Central (MAQ) | 10:15 AM | Destination | 0 Mins | 634 KMs | 1 |